Published in: Cell, vol. 101, pp. 601–611, (June, 2000):


"Structural Organization of the RNA Polymerase-Promoter Open Complex".


Nikolai Naryshkin, Andrey Revyakin, Younggyu Kim, Vladimir Mekler, and Richard H. Ebright.
Howard Hughes Medical Institute, Waksman Institute, Department of Chemistry, Rutgers University, Piscataway, New Jersey 08854

Corresponding author: Richard H. Ebright, 732 445 5179 (phone), 732 445 5735 (fax), ebright@mbcl.rutgers.edu



Abstract:

We have used systematic site-specific protein–DNA photocrosslinking to define interactions between bacterial RNA polymerase (RNAP) and promoter DNA in the catalytically competent RNAP-promoter open complex (RPo). We have mapped more than 100 distinct crosslinks between individual segments of RNAP subunits and individual phosphates of promoter DNA. The results provide a comprehensive description of protein–DNA interactions in RPo, permit construction of a detailed model for the structure of RPo, and permit analysis of effects of a transcriptional activator on the structure of RPo.



Additional References:

"Architecture of RNA Polymerase II and Implications for the Transcription Mechanism".

"6S RNA Regulates E. coli RNA Polymerase Activity".


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